NEMATODE EXTRACTION EFFICIENCY IS INFLUENCED BY SOIL DEPTH AND INOCULATION LEVEL

Authors

  • Lesley A. Schumacher USDA, Agricultural Research Service, Crop Genetics and Breeding Research Unit, Tifton, GA 31793, USA
  • Zane J. Grabau Entomology and Nematology Department, University of Florida, Gainesville, FL 32611, USA

DOI:

https://doi.org/10.63965/BLNJ3327

Abstract

There is a need for evaluating nematode abundances from different soil types by optimizing extraction efficiency (i.e., nematode recovery) because soil texture, pH, and soil organic matter change as soil depth increases. Therefore, the extraction efficiency of a modified Baermann technique on soil recovered from different depths (0‑30 cm, 30-60 cm, 60-90 cm, and 90-120 cm) at a long-term peanut-cotton rotation study in Quincy, FL, USA was examined. This was accomplished by evaluating the relative efficiency of reniform (Rotylenchulus reniformis) and free-living nematode extraction from these different soil depths based on the addition of known quantities of nematodes to microwave-treated soil. Depth and nematode inoculation levels both significantly affected extraction efficiency of reniform and free-living nematodes, but in different ways. For reniform nematode, extraction efficiency ranged from 36% at the deepest depth (90‑120 cm) and increased to 47% at the shallowest depth (0-30 cm). Yet, for free-living nematodes, extraction efficiency ranged from 25% at the deepest depth and increased to 36% at the shallowest depth. Reniform nematode extraction efficiency was greatest (39%) with the lowest inoculation rate (i.e., 1,000 reniform nematodes per 100 cm3 soil), while trends with free-living nematode extraction efficiency were inconsistent. This work highlights the need to understand that true nematode population densities may be underestimated due to soil type and correction factors may need to be implemented for diagnostic and management purposes.

References

Arshad, M. A., Lowery, B., & Grossman, B. (1996). Physical tests for monitoring soil quality. In J. W. Doran, & A. J. Jones, Methods for assessing soil quality (pp. 123–141). Soil Science Society of America Special Publication 49. Madison, WI: Soil Science Society of America.

Barker, K. R., Gooding, G. V., Elder, A. S., & Eplee, R. E. (1972). Killing and preserving nematodes in soil samples with chemicals and microwave energy. Journal of Nematology, 4(2), 75–79.

Been, T. H., & Schomaker, C. H. (2006). Distribution patterns and sampling. In R. N. Perry, & M. Moens (Eds.). Plant nematology (p. 325). Wallingford, UK: CABI.

Blasingame, D., Gazaway, W., Goodell, P., Kemerait, R., Kirkpatrick, T., Konning, S., Lawrence, G. W., McClure, M., Mueller, J., Newman, M., Overstreet, C., Phipps, P., Rich, J., Thomas, S., Wheeler, T., & Wrather, A. (2002). Cotton nematodes: Your hidden enemies. National Cotton Council, Memphis, TN.

Bongers, T. (1990). The maturity index: An ecological measurement of environmental disturbance based on nematode species composition. Oecologia, 83, 14–19. https://doi.org/10.1007/BF00324627

Bongers, T., & Bongers, M. (1998). Functional diversity of nematodes. Applied Soil Ecology 10(3), 239–251. https://doi.org/10.1016/S0929-1393(98)00123-1

Cesarz, S., Schulz, A. E., Beugnon, R., & Eisenhauer, N. (2019). Testing soil nematode extraction efficiency using different variations of the Baermann-funnel method. Soil Organisms, 91 (2), 61–72. https://doi.org/10.25674/so91201

Chen, P., Liu, S-C., Liu, H-I., Chen, T-W., & Chiang, K-S. (2011). Probability of detecting nematode infestations for quarantine sampling with imperfect extraction efficacy. Journal of Nematology, 43(1), 16–24.

Coleman, D. C., & Wall, D. H. (2015). Soil fauna: Occurrence, biodiversity, and roles in ecosystem function. In E. A. Paul (Ed.). Soil microbiology, ecology, and biochemistry (pp. 111–149). London, UK: Academic Press.

Davis, R. F., Koenning, S. R., Kemerait, R. C., Cummings, T. D., & Shurley, W. D. (2003). Rotylenchulus reniformis management in cotton with crop rotation. Journal of Nematology, 35(1), 58–64.

Doshi, R. A., King, R. L., & Lawrence, G. W. (2010). Classification of Rotylenchulus reniformis numbers in cotton using remotely sensed hyperspectral data on self-organizing maps. Journal of Nematology, 42(3), 179–193.

Edwards, C. A. (1991). The assessment of populations of soil-inhabiting invertebrates. Agriculture, Ecosystems and Environment, 34, 145–176.

Ferris, H., Bongers, T., & de Goede, R. G. M. (2001). A framework for soil food web diagnostics: Extension of the nematode faunal analysis concept. Applied Soil Ecology, 18 (1), 13–29. https://doi.org/10.1016/S0929-1393(01)00152-4

Franco, A. L. C., Knox, M. A., Andriuzzi, W. S., de Tomasel, C. M., Sala, O. E., & Wall, D. H. (2017). Nematode exclusion and recovery in experimental soil microcosms. Soil Biology and Biochemistry, 108, 78-83. https://doi.org/10.1016/j.soilbio.2017.02.001

Freckman, D. W.. & Virginia, R. A. (1989). Plant‑feeding nematodes in deep-rooting desert ecosystems. Ecology 70(6), 1665–1678. https://doi.org/10.2307/1938101

Harris, A. R. (1990). Evaluating resistance to ectoparasitic nematode species. In J. L. Starr (Ed.). Methods for evaluating plant species for resistance to plant-parasitic nematodes (pp. 67-87). Hyattsville, USA: The Society of Nematologists.

Harrison, J. M., & Green, C. D. (1976). Comparison of centrifugal and other methods for standardization of extraction of nematodes from soil. Annals of Applied Biology, 82(2), 299–308. https://doi.org/10.1111/j.1744-7348.1976.tb00565.x

Holguin, C. M., Gerard, P., Mueller, J. D., Khalilian, A., & Agudelo, P. (2015). Spatial distribution of reniform nematode in cotton as influenced by soil texture and crop rotations. Phytopathology, 105(5), 674–683. https://doi.org/10.1094/PHYTO-09-14-0240-R

Jenkins, W. R. (1964). A rapid centrifugal-flotation technique for separating nematodes from soil. Plant Disease Reporter, 48(9), 692.

Katsvairo, T. W., Wright, D. L., Marois, J. J., Hartzog, D. L., Rich, J. R., & Wiatrak, P. J. (2006). Sod-livestock integration into the peanut-cotton rotation: A systems farming approach. Agronomy Journal, 98(4), 1156–1171. https://doi.org/10.2134/agronj2005.0088

Knox, O., Polain, K., Fortescue, E., & Griffiths, B. (2020). Distribution and restricted vertical movement of nematodes in a heavy clay soil. Agronomy, 10(221), 1–8. https://doi.org/10.3390/agronomy10020221

Koenning, S. (2002). Economics and ecology put to use—action thresholds. Proceedings of the Beltwide Cotton Conferences of the National Cotton Council of America, 1, 143–147.

Koenning, S. R., Walters, S. A., & Barker, K. R. (1996). Impact of soil texture on the reproductive and damage potential of Rotylenchulus reniformis and Meloidogyne incognita on cotton. Journal of Nematology, 28(4), 527–536.

Linford, M. B., & Oliveira, J. M. (1940). Rotylenchulus reniformis, nov. gen., n. sp., a nematode parasite of roots. Proceedings of the Helminthological Society of Washington, 7, 35–42.

Maltais-Landry, G., James, M., Wilson, C., Schumacher, L., Grabau, Z., Sidhu, S., & George, S. (2023). Long-term integration of bahiagrass into a cover-cropped and strip-tilled peanut-cotton rotation has a limited effect on soil carbon and other soil properties. Soil Science Society of America Journal, 88 (1), 1–7. https://doi.org/10.1002/saj2.20602

Neher, D. A., Peck, S. L., Rawlings, J. O., & Campbell, C. L. (1995). Measures of nematode community structure and sources of variability among and within agricultural fields. Plant and Soil, 170, 167–181. https://doi.org/10.1007/BF02183065

Neher, D. A. (1999). Soil community composition and ecosystem processes: Comparing agricultural systems with natural ecosystems. Agroforestry Systems 45, 159–185. https://doi.org/10.1023/A:1006299100678

Neher, D. A. (2001). Role of nematodes in soil health and their use as indicators. Journal of Nematology, 33(4), 161–168.

McSorley, R., & Frederick, J. J. (1991). Extraction efficiency of Belonolaimus longicaudatus from sandy soil. Journal of Nematology, 23(4), 511–518.

McSorley, R., & Littell, R. C. (1993). Probability of detecting nematode infestations in quarantine samples. Nematropica, 23(2), 177–181.

McSorley, R., & Parrado, J. L. (1987). Nematode losses during centrifugal extraction from two soil types. Nematropica, 17(2), 147–161.

Procter, D. L. C. (1977). Nematode densities and production on the Truelove Lowland. In L. C. Bliss (Ed.). Truelove Lowland, Devon Island, Canada: A High Arctic Ecosystem (pp. 347–361). Alberta, Canada: University of Alberta Press.

Robinson, A. F., Akridge, R., Bradford, J. M., Cook, C. G., Gazaway, W. S., Kirkpatrick, T. L., Lawrence, G. W., Lee, G., McGawley, E. C., Overstreet, C., Padgett, B., Rodriguez-Kabana, R., Westphal, A., & Young, L. D. (2005). Vertical distribution of Rotylenchulus reniformis in cotton fields. Journal of Nematology, 37(3), 265–271.

Robinson, A. F., Heald, C. M., Flanagan, S. L., Thames, W. H., & Amador, J. (1987). Geographical distributions of Rotylenchulus reniformis, Meloidogyne incognita, and Tylenchulus semipenetrans in the Lower Rio Grand Valley as related to soil texture and land use. Annals of Applied Nematology, 1, 20–25.

Ruess, L. (1995). Studies on the nematode fauna of an acid forest soil: Spatial distribution and extraction. Nematologica, 41, 229–239.

Schratzberger, M., Holterman, M., Van Oevelen, D., & Helder, J. (2019). A worm’s world: Ecological flexibility pays off for free-living nematodes in sediments and soils. BioScience 69(11), 867–876. https://doi.org/10.1093/biosci/biz086

Schumacher, L. A., Liao, H.-L., Small, I. M., & Grabau, Z. J. (2024). Vertical distribution of plant-parasitic nematodes in peanut-cotton cropping systems. Applied Soil Ecology, 200, 105445. https://doi.org/10.1016/j.apsoil.2024.105445

Southey, J. F. (1986). Techniques for the extraction of nematodes from soil or plant parts, killing, fixing, and preparing temporary or permanent mounts. In J. Southey (Ed.). Laboratory methods for work with plant and soil nematodes (pp. 12–14). London, UK: Ministry of Agriculture, Fisheries and Food, Reference Book 402.

Starr, J. L., Heald, C. M., Robinson, A. F., Smith, R. G., & Krausz, J. P. (1993). Meloidogyne incognita and Rotylenchulus reniformis and associated soil textures from some cotton production areas of Texas. Supplement to Journal of Nematology, 25(4S), 895–899.

Stork, N. E., & Eggleton, P. (1992). Invertebrates as determinants and indicators of soil quality. American Journal of Alternative Agriculture, 7 (1–2), 38–47. https://doi.org/10.1017/S0889189300004446

Van den Hoogen, J. Geisen, S., Routh, D., Ferris, H., Traunspurger, W., Wardle, D., Goede, R., Adams, B., Ahmad, W., Andriuzzi, W., Bardgett, R., Bonkowski, M., Campos-Herrera, R., Cares, J., Caruso, T., Caixeta, L., Chen, X., Costa, S., Creamer, R., & Crowther, T. (2019). Soil nematode abundance and functional group composition at a global scale. Nature, 572, 194–198. https://doi.org/10.1038/s41586-019-1418-6

Verschoor, B. C., & De Goede, R. G. M. (2000). The nematode extraction efficiency of the Oostenbrink elutriator-cottonwool filter method with special reference to nematode body size and life strategy. Nematology, 2(3), 325–342.

Viglierchio, D. R., & Schmitt, R. V. (1983). On the methodology of nematode extraction from field samples: Comparison of methods for soil extraction. Journal of Nematology, 15(3), 438–444.

Wang, S., Riggs, R. D., & Crippen, D. (1998). Soil infestation density affects the results of Heterodera glycines race tests. Supplement to Journal of Nematology, 30(4S), 553–562.

Wheeler, T. A., Porter, D. O., Archer, D., & Mullinix, B. G. Jr. (2008). Effect of fumigation on Rotylenchulus reniformis population density through subsurface drip irrigation located every other furrow. Journal of Nematology, 40(3), 210–216.

Whitehead, A. G., & Hemming, J. R. (1965). A comparison of some quantitative methods for extracting small vermiform nematodes from soil. Annals of Applied Biology, 55(1), 25–38. https://doi.org/10.1111/j.1744-7348.1965.tb07864.x

Wright, D. L., Marois, J. J., Anguelov, G., & Mackowiak, C. M. (2010). Enhanced crop, soil, economic, and environmental benefits with sod-based rotations. In ASA-CSSA-SSSA International Annual Meetings, Long Beach, CA.

Zhao, D., Wright, D. L., Marois, J. J., Mackowiak, C. L., & Brennan, M. (2010). Improved growth and nutrient status of an oat cover crop in sod-based versus conventional peanut‑cotton rotations. Agronomy for Sustainable Development, 30, 497-504. https://doi.org/10.1051/agro/2009045

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Published

2026-06-05

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ELECTRONIC ARTICLE/ARTICULO ELECTRONICO